Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Repressor protein ci | ALQ79_101660 | Not Available | Positive | 1906723 - 1907562 | 30136.2 |
| prophage psssm-04, putative transcriptional regulator | ALQ79_00878 | Not Available | Negative | 3549078 - 3549344 | 9884.8 |
| hypothetical protein | ALQ79_00879 | Not Available | Negative | 3549442 - 3549690 | 9251.78 |
| Repressor protein | ALQ79_00880 | Not Available | Negative | 3549845 - 3550504 | 24621.9 |
| hypothetical protein | ALQ79_00881 | Not Available | Positive | 3550646 - 3551089 | 16000.3 |
| Com translational regulator | ALQ79_04693 | Not Available | Positive | 3551362 - 3551556 | 7100.72 |
| prophage pspph01, putative cellulase | ALQ79_00882 | Not Available | Positive | 3551559 - 3552731 | 42412.2 |
| Holin | ALQ79_00883 | Not Available | Positive | 3552854 - 3553243 | 14112.7 |
| Hypothetical protein | ALQ79_00884 | Not Available | Positive | 3553608 - 3554198 | 21241.8 |
| Hypothetical protein | ALQ79_00885 | Not Available | Positive | 3554195 - 3554383 | 6996.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







