Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | ALQ79_100549 | Not Available | Negative | 1893141 - 1893308 | 6140.27 |
| Hypothetical protein | ALQ79_00352 | Not Available | Negative | 1893305 - 1893595 | 10399.4 |
| Lysis protein | ALQ79_00353 | Not Available | Negative | 1893629 - 1894108 | 17475.0 |
| Endolysin | ALQ79_00354 | Not Available | Negative | 1894105 - 1894632 | 18491.3 |
| prophage psssm-01, orf15 | ALQ79_00355 | Not Available | Negative | 1894629 - 1894835 | 7391.12 |
| Dksa/trar family c4-type zinc finger protein | ALQ79_00356 | Not Available | Negative | 1894835 - 1895044 | 7607.19 |
| Putative tail tube protein | ALQ79_00357 | Not Available | Negative | 1895044 - 1895496 | 15887.8 |
| Putative tail sheath protein | ALQ79_00358 | Not Available | Negative | 1895500 - 1896612 | 39343.4 |
| Virion morphogenesis family protein | ALQ79_00359 | Not Available | Negative | 1896627 - 1897295 | 25061.3 |
| Putative tail protein | ALQ79_00360 | Not Available | Negative | 1897285 - 1897728 | 16401.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







