Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator phhr | ALQ79_04996 | Not Available | Negative | 907722 - 909314 | 58097.4 |
| phenylalanine 4-monooxygenase | ALQ79_02118 | Not Available | Positive | 909580 - 910377 | 30071.2 |
| putative pterin-4-alpha-carbinolamine dehydratase | ALQ79_02119 | Not Available | Positive | 910413 - 910769 | 13322.9 |
| hypothetical protein | ALQ79_02120 | Not Available | Positive | 910995 - 911135 | 4902.67 |
| hypothetical protein | ALQ79_02121 | Not Available | Positive | 911224 - 911403 | 6378.62 |
| putative transporter | ALQ79_100481 | Not Available | Positive | 911497 - 912741 | 43300.1 |
| peptidyl-trna hydrolase domain protein | ALQ79_02122 | Not Available | Negative | 913001 - 913414 | 15149.3 |
| aromatic amino acid permease | ALQ79_100365 | Not Available | Negative | 913446 - 914918 | 53280.9 |
| pseudouridine synthase | ALQ79_02123 | Not Available | Negative | 915127 - 916353 | 45687.5 |
| hypothetical protein | ALQ79_101651 | Not Available | Negative | 916378 - 916512 | 4875.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







