Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-cysteine desulfhydrase | ALQ79_03396 | Not Available | Negative | 889137 - 890135 | 35502.7 |
| serine o-acetyltransferase | ALQ79_05337 | Not Available | Positive | 890204 - 891286 | 38932.7 |
| rna polymerase sigma-70 protein | ALQ79_100636 | Not Available | Negative | 891300 - 892166 | 31652.1 |
| rna polymerase sigma-70 protein | ALQ79_100109 | Not Available | Negative | 892004 - 892576 | 21538.4 |
| hypothetical protein | ALQ79_03398 | Not Available | Negative | 892674 - 893243 | 19826.8 |
| na antiporter nhaa | ALQ79_03399 | Not Available | Negative | 893314 - 894495 | 41203.6 |
| hypothetical protein | ALQ79_100632 | Not Available | Positive | 895886 - 895999 | 3973.92 |
| n-formimino-l-glutamate deiminase | ALQ79_05339 | Not Available | Positive | 896038 - 897411 | 50380.6 |
| hypothetical protein | ALQ79_101451 | Not Available | Positive | 897658 - 899619 | 75102.2 |
| hypothetical protein | ALQ79_02259 | Not Available | Positive | 899788 - 900210 | 15493.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







