Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| topoisomerase domain-containing protein | ALQ79_05598 | Not Available | Negative | 866917 - 867168 | 9183.44 |
| aerotaxis receptor aer | ALQ79_04438 | Not Available | Positive | 867518 - 869083 | 56679.0 |
| integrase | ALQ79_01207 | Not Available | Positive | 869223 - 869642 | 15349.5 |
| hypothetical protein | ALQ79_01208 | Not Available | Positive | 869733 - 870368 | 23931.7 |
| rnd family efflux transporter mfp subunit | ALQ79_03384 | Not Available | Positive | 871647 - 872765 | 39580.5 |
| rnd efflux transporter | ALQ79_05334 | Not Available | Positive | 873847 - 876948 | 113780.0 |
| hypothetical protein | ALQ79_03386 | Not Available | Negative | 877001 - 877492 | 17971.9 |
| ubiquinone/menaquinone biosynthesis methyltransferase ubie | ALQ79_03387 | Not Available | Negative | 877623 - 878249 | 23611.7 |
| d-methionine abc transporter, permease protein | ALQ79_03388 | Not Available | Negative | 878306 - 878950 | 23083.0 |
| methionine abc transporter atp-binding protein | ALQ79_100097 | Not Available | Negative | 878940 - 880157 | 44600.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







