Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_04429 | Not Available | Negative | 852652 - 853731 | 39635.3 |
| abc transporter permease | ALQ79_04430 | Not Available | Negative | 853721 - 856201 | 90189.1 |
| abc transporter | ALQ79_04431 | Not Available | Negative | 856201 - 856869 | 24161.1 |
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmc | ALQ79_05593 | Not Available | Negative | 857044 - 859026 | 72088.7 |
| hypothetical protein | ALQ79_04433 | Not Available | Positive | 859189 - 860685 | 57899.1 |
| hypothetical protein | ALQ79_04434 | Not Available | Negative | 860738 - 861142 | 15186.0 |
| hypothetical protein | ALQ79_04435 | Not Available | Negative | 861153 - 861740 | 21918.6 |
| atp-dependent dna helicase recq | ALQ79_05596 | Not Available | Positive | 861518 - 864046 | 94056.5 |
| transcriptional regulator, marr family | ALQ79_05597 | Not Available | Positive | 864317 - 864574 | 9550.71 |
| lysm domain-containing protein | ALQ79_04437 | Not Available | Positive | 864670 - 866877 | 77630.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







