Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| papain cysteine protease protein | ALQ79_03030 | Not Available | Negative | 814106 - 814873 | 28685.2 |
| hypothetical protein | ALQ79_03031 | Not Available | Positive | 815275 - 815727 | 16730.9 |
| o-methyltransferase involved in polyketide biosynthesi | ALQ79_102372 | Not Available | Positive | 815932 - 816045 | 4211.17 |
| vira/g regulated protein product | ALQ79_03032 | Not Available | Negative | 816049 - 816480 | 15103.9 |
| methyl-accepting chemotaxis protein | ALQ79_03033 | Not Available | Positive | 816644 - 818317 | 59623.8 |
| hypothetical protein | ALQ79_102561 | Not Available | Negative | 818314 - 818553 | 8371.11 |
| ribose abc transporter periplasmic ribose-binding protein | ALQ79_03034 | Not Available | Positive | 818534 - 819538 | 35884.3 |
| ribose abc transporter atp-binding protein | ALQ79_03035 | Not Available | Positive | 819554 - 821107 | 55877.3 |
| ribose abc transporter permease | ALQ79_03036 | Not Available | Positive | 821094 - 822098 | 34215.4 |
| ribose abc transporter permease | ALQ79_03037 | Not Available | Positive | 822095 - 823081 | 33729.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







