Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter periplasmic amino acid-binding protein | ALQ79_03022 | Not Available | Positive | 802600 - 803529 | 32798.0 |
| amine oxidase, flavin-containing | ALQ79_03023 | Not Available | Positive | 803552 - 805135 | 57486.9 |
| amine oxidase, flavin-containing | ALQ79_03024 | Not Available | Positive | 805143 - 805610 | 16448.6 |
| type iii effector hopv1 | ALQ79_05222 | Not Available | Negative | 805656 - 806942 | 46720.4 |
| type iii chaperone shcv | ALQ79_100445 | Not Available | Negative | 806939 - 807337 | 14915.8 |
| xylose abc transporter membrane protein | ALQ79_05223 | Not Available | Negative | 807475 - 808611 | 39908.3 |
| xylose import atp-binding protein xylg | ALQ79_03026 | Not Available | Negative | 808612 - 810168 | 56182.4 |
| d-xylose abc transporter periplasmic-d xylose binding protein | ALQ79_05225 | Not Available | Negative | 810262 - 811491 | 44500.7 |
| xylose isomerase | ALQ79_05226 | Not Available | Negative | 811403 - 812797 | 51978.2 |
| helix-turn-helix, arac type:periplasmic binding protein/laci transcriptional regulator | ALQ79_03029 | Not Available | Positive | 812902 - 814101 | 43717.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







