Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr response regulator receiver | ALQ79_03008 | Not Available | Positive | 783217 - 783897 | 24684.5 |
| uvrabc system protein c | ALQ79_03009 | Not Available | Positive | 783900 - 785723 | 67107.5 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | ALQ79_100003 | Not Available | Positive | 785756 - 786316 | 20542.9 |
| sugar abc transporter periplasmic sugar-binding protein | ALQ79_03010 | Not Available | Negative | 786923 - 787849 | 33474.4 |
| hypothetical protein | ALQ79_101482 | Not Available | Positive | 787836 - 787955 | 4718.03 |
| hydroxypyruvate isomerase | ALQ79_03011 | Not Available | Negative | 787942 - 788730 | 28160.5 |
| gfo/idh/moca family oxidoreductase | ALQ79_03012 | Not Available | Negative | 788727 - 789749 | 36062.1 |
| sigma-54 dependent transcriptional regulator | ALQ79_03013 | Not Available | Positive | 789943 - 791937 | 72196.6 |
| laci family transcriptional regulator | ALQ79_03014 | Not Available | Negative | 791944 - 792993 | 37462.2 |
| mocd | ALQ79_03015 | Not Available | Positive | 793156 - 794247 | 41651.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







