Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii effector hopaw1 | ALQ79_02184 | Not Available | Negative | 730126 - 730788 | 24850.3 |
| hypothetical protein | ALQ79_102233 | Not Available | Positive | 730920 - 731063 | 5377.4 |
| Trna-asp | Not Available | Not Available | Positive | 732391 - 732467 | Not Available |
| hypothetical protein | ALQ79_102825 | Not Available | Positive | 732479 - 732592 | 3947.79 |
| Trna-asp | Not Available | Not Available | Positive | 732583 - 732659 | Not Available |
| putative lipoprotein | ALQ79_01517 | Not Available | Positive | 732893 - 733711 | 28439.3 |
| hypothetical protein | ALQ79_05599 | Not Available | Negative | 734467 - 734736 | 10187.3 |
| hypothetical protein | ALQ79_04439 | Not Available | Negative | 734787 - 735398 | 22585.5 |
| dna topoisomerase | ALQ79_05169 | Not Available | Negative | 736640 - 736994 | 13203.0 |
| putative gtrc | ALQ79_03772 | Not Available | Negative | 737006 - 737776 | 28595.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







