Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aminoacrylate peracid reductase rutc | ALQ79_02102 | Not Available | Negative | 712938 - 713321 | 13689.5 |
| peroxyureidoacrylate/ureidoacrylate amidohydrolase rutb | ALQ79_02103 | Not Available | Negative | 713332 - 714069 | 26300.2 |
| bacterial luciferase protein | ALQ79_100858 | Not Available | Negative | 714069 - 715199 | 41432.3 |
| hypothetical protein | ALQ79_102891 | Not Available | Negative | 715272 - 715403 | 4691.77 |
| tetr family transcriptional regulator | ALQ79_02104 | Not Available | Positive | 715422 - 716150 | 27263.2 |
| bmp protein | ALQ79_02105 | Not Available | Positive | 716372 - 717463 | 39111.6 |
| abc transporter atp-binding protein | ALQ79_02106 | Not Available | Positive | 717460 - 718971 | 53963.8 |
| branched-chain amino acid abc transporter permease | ALQ79_02107 | Not Available | Positive | 718964 - 720079 | 40453.5 |
| branched-chain amino acid abc transporter permease | ALQ79_02108 | Not Available | Positive | 720079 - 721005 | 32426.8 |
| ompa protein | ALQ79_02109 | Not Available | Positive | 721119 - 721808 | 23839.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







