Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna small subunit methyltransferase c | ALQ79_02093 | Not Available | Negative | 699707 - 700705 | 35925.1 |
| transporter, lyse family | ALQ79_02094 | Not Available | Positive | 701025 - 701657 | 22304.6 |
| long-chain-fatty-acid--coa ligase | ALQ79_02095 | Not Available | Positive | 701826 - 703508 | 62239.7 |
| hypothetical protein | ALQ79_02096 | Not Available | Positive | 703820 - 705757 | 69867.2 |
| hypothetical protein | ALQ79_02097 | Not Available | Positive | 705762 - 707150 | 51562.1 |
| regulatory protein, luxr | ALQ79_02098 | Not Available | Positive | 707360 - 710089 | 101718.0 |
| hdig domain-containing protein | ALQ79_04991 | Not Available | Negative | 710114 - 711301 | 43526.1 |
| hypothetical protein | ALQ79_101441 | Not Available | Positive | 711245 - 711418 | 6107.16 |
| fmn reductase rutf | ALQ79_02100 | Not Available | Negative | 711581 - 712117 | 18944.7 |
| putative aminoacrylate hydrolase rutd | ALQ79_02101 | Not Available | Negative | 712114 - 712893 | 28687.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







