Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase s ii | ALQ79_02792 | Not Available | Positive | 581639 - 582820 | 41866.4 |
| fumarate hydratase s ii | ALQ79_02793 | Not Available | Positive | 582845 - 583015 | 6090.41 |
| hypothetical protein | ALQ79_02794 | Not Available | Positive | 583044 - 583511 | 17727.9 |
| superoxide dismutase | ALQ79_02795 | Not Available | Positive | 583513 - 584124 | 22639.7 |
| phosphocarrier protein hpr | ALQ79_02796 | Not Available | Negative | 584309 - 584581 | 9746.95 |
| nucleotide-binding protein | ALQ79_02797 | Not Available | Negative | 584598 - 585455 | 32254.8 |
| pts iia-like nitrogen-regulatory protein ptsn | ALQ79_02798 | Not Available | Negative | 585458 - 585922 | 16640.2 |
| ribosomal subunit interface protein raia/yfia | ALQ79_02799 | Not Available | Negative | 585934 - 586242 | 11610.2 |
| rna polymerase sigma-54 factor | ALQ79_05180 | Not Available | Negative | 586318 - 587853 | 58360.2 |
| abc transporter, atp-binding protein | ALQ79_02801 | Not Available | Negative | 587994 - 588719 | 26500.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







