Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | ALQ79_02774 | Not Available | Positive | 559214 - 560788 | 59065.9 |
| hypothetical protein | ALQ79_02775 | Not Available | Positive | 560894 - 561835 | 33323.8 |
| carboxymuconolactone decarboxylase | ALQ79_100159 | Not Available | Negative | 561832 - 562215 | 13970.6 |
| k+-dependent na+/ca+ exchanger related-protein | ALQ79_02776 | Not Available | Negative | 562246 - 563277 | 36294.2 |
| rpla protein | ALQ79_02777 | Not Available | Negative | 563355 - 563723 | 13359.9 |
| aspartyl/glutamyl-trna amidotransferase subunit b | ALQ79_05177 | Not Available | Negative | 564166 - 565683 | 55743.6 |
| glutamyl-trna amidotransferase subunit a | ALQ79_02779 | Not Available | Negative | 565622 - 567073 | 51868.7 |
| aspartyl/glutamyl-trna amidotransferase subunit c | ALQ79_02780 | Not Available | Negative | 567088 - 567375 | 10503.5 |
| rod shape-determining protein mreb | ALQ79_02781 | Not Available | Positive | 567581 - 568618 | 37005.8 |
| rod shape-determining protein mrec | ALQ79_02782 | Not Available | Positive | 568850 - 569917 | 38154.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







