Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_05634 | Not Available | Negative | 547151 - 549718 | 93916.1 |
| ribosome-binding factor a | ALQ79_02768 | Not Available | Positive | 549782 - 550198 | 15412.4 |
| trna pseudouridine synthase b | ALQ79_02769 | Not Available | Positive | 550202 - 551119 | 33559.2 |
| 30s ribosomal protein s15 | ALQ79_02770 | Not Available | Positive | 551279 - 551548 | 10001.2 |
| hypothetical protein | ALQ79_100875 | Not Available | Negative | 551631 - 551798 | 6109.4 |
| polyribonucleotide nucleotidyltransferase | ALQ79_02771 | Not Available | Positive | 551724 - 553829 | 74944.4 |
| phospholipid-binding protein | ALQ79_100220 | Not Available | Positive | 553980 - 554471 | 17404.1 |
| hypothetical protein | ALQ79_02772 | Not Available | Negative | 554610 - 554984 | 13767.3 |
| hypothetical protein | ALQ79_05175 | Not Available | Negative | 554944 - 557961 | 110977.0 |
| putative sam-dependent methyltransferase | ALQ79_05176 | Not Available | Negative | 558040 - 559098 | 38919.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







