Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bame | ALQ79_02749 | Not Available | Negative | 524856 - 525377 | 19109.7 |
| fur | ALQ79_02750 | Not Available | Positive | 525545 - 525883 | 12637.9 |
| dna repair protein recn | ALQ79_02751 | Not Available | Negative | 525946 - 527619 | 61296.6 |
| protein grpe | ALQ79_02752 | Not Available | Positive | 527890 - 528453 | 20691.3 |
| chaperone protein dnak | ALQ79_05172 | Not Available | Positive | 528564 - 530480 | 68791.8 |
| chaperone protein dnaj | ALQ79_02754 | Not Available | Positive | 530807 - 531949 | 40491.6 |
| 4-hydroxy-tetrahydrodipicolinate reductase | ALQ79_02755 | Not Available | Positive | 531971 - 532774 | 28053.9 |
| carbamoyl-phosphate synthase small chain | ALQ79_02756 | Not Available | Positive | 532991 - 534127 | 40615.4 |
| carbamoyl-phosphate synthase large chain | ALQ79_02757 | Not Available | Positive | 534264 - 537485 | 117568.0 |
| transcription elongation factor grea | ALQ79_02758 | Not Available | Positive | 537482 - 537958 | 17419.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







