Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_02560 | Not Available | Negative | 6427910 - 6428083 | 6628.92 |
| pyocin/colicin protein | ALQ79_02641 | Not Available | Negative | 6428195 - 6429646 | 52197.4 |
| hypothetical protein | ALQ79_100576 | Not Available | Positive | 6429575 - 6429718 | 5287.71 |
| quinone oxidoreductase | ALQ79_02642 | Not Available | Negative | 6430071 - 6431048 | 34162.3 |
| putative flagellar protein flil | ALQ79_02643 | Not Available | Positive | 6431179 - 6431586 | 14827.9 |
| hypothetical protein | ALQ79_02644 | Not Available | Negative | 6431593 - 6432042 | 16740.8 |
| repa | ALQ79_02736 | Not Available | Negative | 6432383 - 6433121 | 27160.2 |
| transposase protein | ALQ79_00309 | Not Available | Positive | 6433122 - 6433484 | 13383.8 |
| hypothetical protein | ALQ79_102791 | Not Available | Positive | 6435498 - 6435617 | 4194.1 |
| pyoverdine sidechain peptide synthetase iii | ALQ79_05158 | Not Available | Negative | 6435785 - 6437791 | 75509.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







