Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ALQ79_05566 | Not Available | Negative | 6400841 - 6401764 | 34754.7 |
| glutaryl-coa dehydrogenase | ALQ79_04336 | Not Available | Positive | 6401905 - 6403086 | 43103.8 |
| l-carnitine dehydratase/bile acid-inducible protein f | ALQ79_04337 | Not Available | Positive | 6403099 - 6404319 | 43555.2 |
| hypothetical protein | ALQ79_100637 | Not Available | Negative | 6404417 - 6404752 | 11961.9 |
| host specificity protein j | ALQ79_00814 | Not Available | Negative | 6404731 - 6407910 | 112006.0 |
| hypothetical protein | ALQ79_00815 | Not Available | Negative | 6407910 - 6408308 | 14812.6 |
| hypothetical protein | ALQ79_00816 | Not Available | Negative | 6408311 - 6408913 | 21907.6 |
| putative prophage pssb64-02, orf14 | ALQ79_100807 | Not Available | Negative | 6408913 - 6409497 | 21260.4 |
| hypothetical protein | ALQ79_102713 | Not Available | Negative | 6413249 - 6413614 | 12929.3 |
| hypothetical protein | ALQ79_02559 | Not Available | Negative | 6427206 - 6427451 | 9184.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







