Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transporter | ALQ79_04316 | Not Available | Negative | 6383599 - 6384939 | 50031.2 |
| sensory box sensor histidine kinase phor | ALQ79_04317 | Not Available | Negative | 6385038 - 6386324 | 48282.8 |
| chemotaxis protein chey | ALQ79_04318 | Not Available | Negative | 6386411 - 6387100 | 25584.9 |
| 4-hydroxybenzoate octaprenyltransferase | ALQ79_04319 | Not Available | Negative | 6387269 - 6388159 | 32850.4 |
| putative chorismate pyruvate-lyase | ALQ79_04320 | Not Available | Negative | 6388159 - 6388719 | 20823.8 |
| rubredoxin | ALQ79_04321 | Not Available | Positive | 6388906 - 6389073 | 6190.39 |
| rubredoxin reductase | ALQ79_04322 | Not Available | Positive | 6389111 - 6390259 | 40147.9 |
| dna-binding protein hu family | ALQ79_04323 | Not Available | Positive | 6390450 - 6390725 | 9820.86 |
| putative lipoprotein | ALQ79_04324 | Not Available | Positive | 6390976 - 6391419 | 15075.0 |
| hypothetical protein | ALQ79_04325 | Not Available | Positive | 6391587 - 6391964 | 14095.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







