Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_100990 | Not Available | Positive | 6371329 - 6372492 | 44266.9 |
| acyl-coa dehydrogenase | ALQ79_01883 | Not Available | Negative | 6372536 - 6373687 | 41885.1 |
| enoly-coa hydratase/isomerase protein | ALQ79_100092 | Not Available | Negative | 6373691 - 6374878 | 44101.2 |
| hypothetical protein | ALQ79_100933 | Not Available | Negative | 6374921 - 6375055 | 4745.91 |
| transporter | ALQ79_01884 | Not Available | Positive | 6375118 - 6376437 | 46818.5 |
| transporter | ALQ79_01885 | Not Available | Positive | 6376395 - 6376745 | 12570.4 |
| ggdef domain/eal domain protein | ALQ79_02181 | Not Available | Negative | 6378060 - 6378531 | 17238.6 |
| putative transposase | ALQ79_100690 | Not Available | Negative | 6378562 - 6380133 | 58709.7 |
| putative transposase | ALQ79_01569 | Not Available | Negative | 6380150 - 6380485 | 12284.2 |
| dead/deah box helicase | ALQ79_05083 | Not Available | Negative | 6381779 - 6383276 | 56254.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







