Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate decarboxylase, alpha subunit | ALQ79_00039 | Not Available | Positive | 6341314 - 6342990 | 61411.0 |
| putative 2--3'-dephosphocoenzyme-a synthase | ALQ79_04509 | Not Available | Positive | 6342942 - 6343865 | 32392.1 |
| malonate decarboxylase acyl carrier protein | ALQ79_00041 | Not Available | Positive | 6343867 - 6344166 | 10639.7 |
| malonate decarboxylase subunit beta | ALQ79_00042 | Not Available | Positive | 6344159 - 6345010 | 29993.7 |
| malonate decarboxylase, gamma subunit | ALQ79_00043 | Not Available | Positive | 6345007 - 6345807 | 28191.7 |
| phosphoribosyl-dephospho-coa transferase | ALQ79_00044 | Not Available | Positive | 6345801 - 6346439 | 22802.7 |
| malonyl coa-acyl carrier protein transacylase | ALQ79_00045 | Not Available | Positive | 6346436 - 6347371 | 33187.2 |
| malonate transporter, madl subunit | ALQ79_00046 | Not Available | Positive | 6347441 - 6347869 | 14534.7 |
| malonate transporter, madm subunit | ALQ79_00047 | Not Available | Positive | 6347871 - 6348635 | 25926.6 |
| malonate utilization transcriptional regulator | ALQ79_100169 | Not Available | Negative | 6348646 - 6349647 | 37561.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







