Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate synthase | ALQ79_03206 | Not Available | Positive | 6285258 - 6286547 | 47547.6 |
| hypothetical protein | ALQ79_03207 | Not Available | Negative | 6286614 - 6287225 | 22351.7 |
| proteinase inhibitor | ALQ79_03208 | Not Available | Negative | 6287283 - 6287540 | 8977.85 |
| hypothetical protein | ALQ79_03209 | Not Available | Negative | 6287635 - 6288345 | 25459.1 |
| transcriptional regulator, gntr family | ALQ79_03210 | Not Available | Negative | 6288393 - 6289832 | 53373.7 |
| penicillin-binding protein 1a | ALQ79_04505 | Not Available | Negative | 6290186 - 6292657 | 90472.8 |
| type iv pilus bioproteinsis protein pilm | ALQ79_00002 | Not Available | Positive | 6292837 - 6293901 | 38080.8 |
| type iv pilus bioproteinsis protein piln | ALQ79_00003 | Not Available | Positive | 6293901 - 6294500 | 22119.9 |
| type iv pilus bioproteinsis protein pilo | ALQ79_100543 | Not Available | Positive | 6294497 - 6295120 | 23198.0 |
| type iv pilus bioproteinsis protein pilp | ALQ79_00004 | Not Available | Positive | 6295117 - 6295644 | 19151.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







