Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_101786 | Not Available | Positive | 6263318 - 6263671 | 13084.4 |
| putative type vi secretion system effector, hcp1 family | ALQ79_100241 | Not Available | Negative | 6263744 - 6264259 | 18675.1 |
| chorismate mutase protein | ALQ79_01997 | Not Available | Negative | 6264288 - 6264641 | 13515.2 |
| trna dihydrouridine synthase a | ALQ79_100021 | Not Available | Positive | 6264722 - 6265762 | 38271.0 |
| glucan biosynthesis protein d | ALQ79_01998 | Not Available | Positive | 6265858 - 6267444 | 59746.3 |
| gtrc | ALQ79_01999 | Not Available | Negative | 6267464 - 6268201 | 27535.1 |
| dienelactone hydrolase protein | ALQ79_03194 | Not Available | Negative | 6268342 - 6269070 | 25900.8 |
| chaperone protein htpg | ALQ79_100022 | Not Available | Negative | 6269161 - 6271131 | 73800.5 |
| putative lipoprotein | ALQ79_03195 | Not Available | Positive | 6271382 - 6271642 | 9195.57 |
| branched-chain amino acid transport system ii carrier protein | ALQ79_05261 | Not Available | Negative | 6271751 - 6273097 | 46290.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







