Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline-sulfatase | ALQ79_00191 | Not Available | Negative | 6186397 - 6187920 | 57592.6 |
| lysr family transcriptional regulator | ALQ79_00192 | Not Available | Positive | 6188017 - 6188967 | 35245.4 |
| dopa 4,5-dioxygenase-related protein | ALQ79_00193 | Not Available | Positive | 6189004 - 6189336 | 12278.6 |
| 3-oxoadipate enol-lactonase | ALQ79_00194 | Not Available | Positive | 6189550 - 6190374 | 29974.2 |
| cigr | ALQ79_00195 | Not Available | Negative | 6190520 - 6191050 | 18957.2 |
| tryptophan synthase alpha chain | ALQ79_00196 | Not Available | Negative | 6191176 - 6191988 | 28460.1 |
| tryptophan synthase beta chain | ALQ79_00197 | Not Available | Negative | 6191985 - 6193214 | 44432.2 |
| transcriptional regulator trpi | ALQ79_00198 | Not Available | Positive | 6193294 - 6194250 | 34910.9 |
| hypothetical protein | ALQ79_00199 | Not Available | Negative | 6194251 - 6194577 | 11816.0 |
| hypothetical protein | ALQ79_00200 | Not Available | Positive | 6194744 - 6194959 | 7949.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







