Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | ALQ79_00181 | Not Available | Negative | 6176797 - 6177303 | 19258.4 |
| lysm domain protein | ALQ79_00182 | Not Available | Positive | 6177429 - 6178454 | 37543.9 |
| dna processing protein dpra | ALQ79_00183 | Not Available | Positive | 6178578 - 6179696 | 38972.9 |
| threonylcarbamoyl-amp synthase | ALQ79_00184 | Not Available | Positive | 6179735 - 6180292 | 20537.7 |
| quinone oxidoreductase | ALQ79_00185 | Not Available | Negative | 6180300 - 6181277 | 34313.1 |
| hypothetical protein | ALQ79_00186 | Not Available | Negative | 6181371 - 6181682 | 11413.6 |
| oxygen-dependent coproporphyrinogen-iii oxidase | ALQ79_04535 | Not Available | Positive | 6181881 - 6182801 | 34802.7 |
| shikimate dehydrogenase | ALQ79_00188 | Not Available | Positive | 6182801 - 6183625 | 29367.9 |
| sulfate transporter protein | ALQ79_04536 | Not Available | Negative | 6183687 - 6185342 | 59656.0 |
| glycine betaine family abc transporter substrate-binding protein | ALQ79_00190 | Not Available | Negative | 6185433 - 6186359 | 33151.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







