Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucarate dehydratase | ALQ79_02707 | Not Available | Positive | 6165459 - 6166811 | 49443.0 |
| hypothetical protein | ALQ79_02708 | Not Available | Positive | 6167183 - 6167629 | 16125.8 |
| d-isomer specific 2-hydroxyacid dehydrogenase protein | ALQ79_02709 | Not Available | Positive | 6167670 - 6168626 | 34730.8 |
| type iii effector hopah2 | ALQ79_05156 | Not Available | Positive | 6168856 - 6169533 | 24302.8 |
| hypothetical protein | ALQ79_02554 | Not Available | Positive | 6169624 - 6169869 | 9013.67 |
| trak protein | ALQ79_05108 | Not Available | Positive | 6169898 - 6170153 | 10061.7 |
| oxidoreductase alpha subunit | ALQ79_00178 | Not Available | Negative | 6170562 - 6172925 | 86724.1 |
| potassium transporter peripheral membrane component | ALQ79_100054 | Not Available | Negative | 6173080 - 6174453 | 49824.2 |
| 16s rrna methyltransferase b | ALQ79_00179 | Not Available | Negative | 6174450 - 6175796 | 48357.2 |
| methionyl-trna formyltransferase | ALQ79_00180 | Not Available | Negative | 6175793 - 6176737 | 33577.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







