Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase, small subunit | ALQ79_02688 | Not Available | Positive | 6143937 - 6144323 | 13992.7 |
| alpha/beta fold family hydrolase | ALQ79_02689 | Not Available | Negative | 6144392 - 6145390 | 36650.2 |
| lysr family transcriptional regulator | ALQ79_02690 | Not Available | Positive | 6145645 - 6146574 | 34240.8 |
| phosphate import atp-binding protein pstb | ALQ79_02691 | Not Available | Negative | 6146575 - 6147354 | 29334.5 |
| phosphate abc transporter, permease protein ptsa | ALQ79_02692 | Not Available | Negative | 6147354 - 6148238 | 31411.5 |
| phosphate abc transporter membrane protein 1, phot family | ALQ79_02693 | Not Available | Negative | 6148235 - 6149230 | 35624.1 |
| phosphate-binding protein psts | ALQ79_02694 | Not Available | Negative | 6149312 - 6150331 | 36404.2 |
| hypothetical protein | ALQ79_02695 | Not Available | Positive | 6150863 - 6151147 | 9775.42 |
| hypothetical protein | ALQ79_05153 | Not Available | Positive | 6151247 - 6151549 | 9828.32 |
| hypothetical protein | ALQ79_05154 | Not Available | Negative | 6151525 - 6153234 | 65575.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







