Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | ALQ79_05148 | Not Available | Positive | 6111155 - 6111568 | 15246.4 |
| Trna-asn | Not Available | Not Available | Positive | 6111736 - 6111811 | Not Available |
| methyl-accepting chemotaxis protein | ALQ79_02663 | Not Available | Positive | 6112056 - 6114053 | 71110.6 |
| putative tonb protein | ALQ79_100346 | Not Available | Negative | 6114095 - 6114937 | 31023.6 |
| tolr protein | ALQ79_02664 | Not Available | Negative | 6114934 - 6115380 | 16315.9 |
| tolq protein | ALQ79_02665 | Not Available | Negative | 6115390 - 6116100 | 25676.2 |
| phytase domain protein | ALQ79_02666 | Not Available | Negative | 6116156 - 6118084 | 69451.7 |
| tonb-dependent receptor | ALQ79_05149 | Not Available | Negative | 6118122 - 6120794 | 98188.2 |
| hypothetical protein | ALQ79_05151 | Not Available | Negative | 6120822 - 6120953 | 4974.78 |
| ggdef domain-containing protein | ALQ79_02668 | Not Available | Positive | 6121105 - 6122076 | 36315.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







