Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate carboxypeptidase | ALQ79_02655 | Not Available | Negative | 6097598 - 6098839 | 43426.2 |
| acriflavin resistance protein | ALQ79_05147 | Not Available | Negative | 6098913 - 6101966 | 110652.0 |
| secretion protein hlyd | ALQ79_02657 | Not Available | Negative | 6101963 - 6103030 | 37210.5 |
| mlta-interacting mipa | ALQ79_02658 | Not Available | Negative | 6103113 - 6103964 | 30460.7 |
| rnd efflux system, outer membrane lipoprotein | ALQ79_02659 | Not Available | Negative | 6103984 - 6105456 | 53328.6 |
| response regulator receiver:transcriptional regulatory protein | ALQ79_02660 | Not Available | Positive | 6105555 - 6106244 | 25594.9 |
| sensor histidine kinase | ALQ79_02661 | Not Available | Positive | 6106250 - 6107425 | 43976.7 |
| sulfate transporter/antisigma-factor antagonist stas:sulfate transporter | ALQ79_100162 | Not Available | Negative | 6107449 - 6109077 | 58267.9 |
| transcriptional regulator, gntr family/aminotransferase | ALQ79_02662 | Not Available | Positive | 6109319 - 6110737 | 52035.0 |
| hypothetical protein | ALQ79_101631 | Not Available | Negative | 6110892 - 6111017 | 4277.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







