Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin synthesis protein/p47k protein | ALQ79_02202 | Not Available | Negative | 6063437 - 6064444 | 36811.6 |
| hypothetical protein | ALQ79_100071 | Not Available | Negative | 6064441 - 6064785 | 12724.5 |
| 3-oxoacyl- reductase | ALQ79_02203 | Not Available | Negative | 6064763 - 6065512 | 25676.1 |
| short-chain dehydrogenase/reductase sdr | ALQ79_02204 | Not Available | Negative | 6065544 - 6066305 | 26355.7 |
| major facilitator family transporter | ALQ79_05016 | Not Available | Negative | 6066316 - 6067680 | 48294.1 |
| polysaccharide deacetylase protein | ALQ79_02206 | Not Available | Negative | 6067684 - 6068565 | 33865.3 |
| hypothetical protein | ALQ79_05018 | Not Available | Negative | 6068643 - 6070085 | 50661.9 |
| regulatory protein, gntr | ALQ79_02208 | Not Available | Positive | 6070355 - 6071356 | 37356.0 |
| hypothetical protein | ALQ79_05074 | Not Available | Negative | 6071578 - 6073050 | 55860.7 |
| oxidoreductase, fad-binding protein | ALQ79_04486 | Not Available | Positive | 6073653 - 6074978 | 47019.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







