Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus assembly protein pilv | ALQ79_03578 | Not Available | Positive | 5999667 - 6000182 | 17885.1 |
| type iv pilus assembly protein pilw | ALQ79_03579 | Not Available | Positive | 6000179 - 6000886 | 25378.7 |
| type iv pilus assembly protein pilx | ALQ79_03580 | Not Available | Positive | 6000898 - 6001404 | 17829.8 |
| putative type iv pilus-associated protein | ALQ79_03581 | Not Available | Positive | 6001391 - 6004594 | 113345.0 |
| type iv pilus bioproteinsis protein | ALQ79_03582 | Not Available | Positive | 6004606 - 6005016 | 14384.2 |
| glycine oxidase thio | ALQ79_03583 | Not Available | Positive | 6005044 - 6006156 | 39792.7 |
| rnd efflux transporter | ALQ79_03584 | Not Available | Negative | 6006159 - 6009248 | 112350.0 |
| rnd family efflux transporter mfp subunit | ALQ79_03585 | Not Available | Negative | 6009245 - 6010354 | 39208.8 |
| transcriptional regulator, tetr family | ALQ79_03586 | Not Available | Negative | 6010436 - 6011122 | 25800.8 |
| aldehyde dehydrogenase protein | ALQ79_00104 | Not Available | Negative | 6011446 - 6012966 | 54771.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







