Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin amidase protein | ALQ79_03841 | Not Available | Negative | 5941638 - 5944055 | 89310.5 |
| hypothetical protein | ALQ79_03842 | Not Available | Positive | 5944304 - 5945245 | 34991.4 |
| hypothetical protein | ALQ79_03843 | Not Available | Negative | 5945260 - 5946012 | 27242.4 |
| 2og-fe oxygenase family oxidoreductase | ALQ79_03844 | Not Available | Positive | 5946154 - 5946789 | 24126.8 |
| hypothetical protein | ALQ79_102671 | Not Available | Negative | 5946802 - 5946927 | 4482.5 |
| hypothetical protein | ALQ79_03845 | Not Available | Positive | 5946926 - 5947363 | 15335.6 |
| d-3-phosphoglycerate dehydrogenase | ALQ79_05444 | Not Available | Negative | 5947583 - 5948872 | 46531.0 |
| fad/fmn-containing dehydrogenase | ALQ79_03847 | Not Available | Positive | 5948949 - 5950367 | 52200.4 |
| fumarylacetoacetate hydrolase | ALQ79_03848 | Not Available | Positive | 5950434 - 5951099 | 23747.8 |
| hypothetical protein | ALQ79_03849 | Not Available | Positive | 5951282 - 5952226 | 35202.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







