Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-export protein secb | ALQ79_03821 | Not Available | Positive | 5918284 - 5918772 | 17954.3 |
| trna -methyltransferase | ALQ79_03822 | Not Available | Negative | 5918842 - 5919297 | 16982.2 |
| hypothetical protein | ALQ79_05442 | Not Available | Positive | 5919296 - 5919736 | 16519.7 |
| taurine import atp-binding protein taub | ALQ79_03824 | Not Available | Negative | 5920956 - 5921741 | 28611.7 |
| taurine abc transporter, periplasmic binding protein | ALQ79_03825 | Not Available | Negative | 5921767 - 5922744 | 34537.3 |
| oprd family outer membrane protein | ALQ79_03826 | Not Available | Positive | 5923516 - 5924862 | 48413.1 |
| antioxidant, ahpc/tsa family | ALQ79_03827 | Not Available | Positive | 5925032 - 5925670 | 23953.4 |
| sulfonate abc transporter, periplasmic sulfonate-binding protein ssua | ALQ79_03828 | Not Available | Positive | 5926174 - 5927139 | 34585.9 |
| aliphatic sulfonates abc transporter permease | ALQ79_03829 | Not Available | Positive | 5927168 - 5927965 | 28493.5 |
| aliphatic sulfonates import atp-binding protein ssub | ALQ79_03830 | Not Available | Positive | 5927962 - 5928774 | 29495.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







