Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | ALQ79_100527 | Not Available | Negative | 5892051 - 5892815 | 28019.3 |
| amino acid abc transporter atp-binding protein | ALQ79_03797 | Not Available | Negative | 5892829 - 5893602 | 28468.5 |
| hypothetical protein | ALQ79_101210 | Not Available | Positive | 5893684 - 5893827 | 5112.15 |
| gaba permease | ALQ79_03798 | Not Available | Positive | 5894128 - 5895519 | 49622.7 |
| hypothetical protein | ALQ79_03799 | Not Available | Negative | 5895567 - 5896052 | 18101.5 |
| putative methyl-accepting chemotaxis signaling protein | ALQ79_05437 | Not Available | Negative | 5896194 - 5897540 | 49030.3 |
| hypothetical protein | ALQ79_102730 | Not Available | Positive | 5897638 - 5897811 | 6613.24 |
| putative lipoprotein | ALQ79_03801 | Not Available | Negative | 5897853 - 5898131 | 9826.37 |
| hypothetical protein | ALQ79_03802 | Not Available | Negative | 5898311 - 5898748 | 16379.5 |
| Trna-phe | Not Available | Not Available | Positive | 5899430 - 5899505 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







