Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_102579 | Not Available | Positive | 5863523 - 5863798 | 10206.8 |
| alginate regulatory protein muca | ALQ79_01019 | Not Available | Negative | 5863831 - 5864421 | 20785.6 |
| rna polymerase sigma factor | ALQ79_01020 | Not Available | Negative | 5864455 - 5865042 | 22530.7 |
| l-aspartate oxidase | ALQ79_100127 | Not Available | Positive | 5865479 - 5867140 | 61610.8 |
| hypothetical protein | ALQ79_01021 | Not Available | Negative | 5869195 - 5869596 | 14939.9 |
| levansucrase | ALQ79_00943 | Not Available | Positive | 5870215 - 5870923 | 25782.1 |
| ispsy21, transposase orfb | ALQ79_00944 | Not Available | Negative | 5871089 - 5872006 | 34955.4 |
| is51, transposase orfa | ALQ79_04702 | Not Available | Negative | 5872003 - 5872326 | 12685.3 |
| hypothetical protein | ALQ79_01749 | Not Available | Negative | 5872444 - 5872956 | 19174.5 |
| dna-binding protein | ALQ79_01750 | Not Available | Positive | 5873195 - 5873647 | 15550.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







