Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_102808 | Not Available | Positive | 5843274 - 5843390 | 4462.6 |
| gntr family transcriptional regulator | ALQ79_00386 | Not Available | Positive | 5843809 - 5844561 | 27354.6 |
| hydroxyglutarate oxidase | ALQ79_00387 | Not Available | Positive | 5844637 - 5845059 | 15129.5 |
| protozoan/cyanobacterial globin protein | ALQ79_01004 | Not Available | Negative | 5845225 - 5845653 | 15846.5 |
| hypothetical protein | ALQ79_01005 | Not Available | Negative | 5845653 - 5846528 | 31398.0 |
| hamp domain/ggdef domain/eal domain protein | ALQ79_04716 | Not Available | Negative | 5846532 - 5848886 | 85588.7 |
| protein containing plastocyanin/azurin family domain | ALQ79_101018 | Not Available | Negative | 5848883 - 5849653 | 27686.0 |
| lon protease | ALQ79_01007 | Not Available | Positive | 5849740 - 5852157 | 89450.8 |
| putative lipoprotein | ALQ79_01008 | Not Available | Positive | 5852488 - 5852880 | 14067.8 |
| trna -methyltransferase | ALQ79_01009 | Not Available | Positive | 5852981 - 5853724 | 27570.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







