Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_01281 | Not Available | Positive | 5781890 - 5782150 | 9529.59 |
| urease subunit alpha | ALQ79_01282 | Not Available | Negative | 5782218 - 5783918 | 60710.8 |
| urease subunit beta | ALQ79_01283 | Not Available | Negative | 5784250 - 5784558 | 11162.3 |
| tabtoxin resistance protein | ALQ79_01284 | Not Available | Negative | 5784555 - 5785088 | 19236.1 |
| phosphinothricin n-acetyltransferase | ALQ79_01285 | Not Available | Negative | 5785099 - 5785647 | 20280.3 |
| urease subunit gamma | ALQ79_01286 | Not Available | Negative | 5785652 - 5785954 | 10998.4 |
| urease accessory protein ured | ALQ79_01287 | Not Available | Negative | 5786257 - 5787102 | 31078.2 |
| branched-chain amino acid abc transporter, atp-binding protein | ALQ79_01288 | Not Available | Negative | 5787155 - 5787853 | 25656.5 |
| branched-chain amino acid abc transporter, atp-binding protein | ALQ79_01289 | Not Available | Negative | 5787950 - 5788810 | 30968.3 |
| branched-chain amino acid abc transporter permease | ALQ79_01290 | Not Available | Negative | 5788807 - 5789886 | 38850.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







