Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs element vgr protein | ALQ79_00915 | Not Available | Negative | 5760002 - 5760517 | 18368.1 |
| threonine dehydratase | ALQ79_101363 | Not Available | Positive | 5760711 - 5761335 | 22073.3 |
| dna ligase b | ALQ79_02156 | Not Available | Positive | 5761728 - 5763413 | 62229.4 |
| hypothetical protein | ALQ79_02157 | Not Available | Positive | 5763454 - 5763864 | 15188.0 |
| hypothetical protein | ALQ79_02158 | Not Available | Negative | 5763912 - 5764313 | 14159.7 |
| heavy metal sensor histidine kinase | ALQ79_02159 | Not Available | Negative | 5764428 - 5765819 | 51639.8 |
| dna-binding heavy metal response regulator | ALQ79_02160 | Not Available | Negative | 5765816 - 5766490 | 25704.2 |
| czcc family cobalt/zinc/cadmium efflux transporter outer membrane protein | ALQ79_02161 | Not Available | Positive | 5766748 - 5767983 | 44718.2 |
| cation efflux protein | ALQ79_02162 | Not Available | Positive | 5768051 - 5769304 | 44497.5 |
| cation efflux protein | ALQ79_02163 | Not Available | Positive | 5769329 - 5772484 | 113415.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







