Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_100023 | Not Available | Negative | 5738322 - 5738681 | 13238.1 |
| doxd-like protein | ALQ79_02318 | Not Available | Negative | 5738873 - 5739307 | 15064.0 |
| transglycosylase, slt family | ALQ79_02319 | Not Available | Negative | 5739414 - 5740835 | 52644.5 |
| deoxyribonuclease tatd | ALQ79_05048 | Not Available | Positive | 5740966 - 5741853 | 33124.3 |
| methyl-accepting chemotaxis protein | ALQ79_02321 | Not Available | Positive | 5741938 - 5743413 | 52623.7 |
| hypothetical protein | ALQ79_02322 | Not Available | Positive | 5743538 - 5743780 | 8781.76 |
| putative acyl-coa thioesterase ii | ALQ79_05049 | Not Available | Negative | 5743794 - 5744654 | 30984.7 |
| transglutaminase-like protein | ALQ79_02324 | Not Available | Negative | 5744713 - 5745474 | 28554.8 |
| transglutaminase-like protein | ALQ79_05050 | Not Available | Negative | 5745499 - 5747544 | 76497.7 |
| hypothetical protein | ALQ79_02326 | Not Available | Negative | 5747505 - 5748461 | 35484.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







