Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_102243 | Not Available | Negative | 5730756 - 5730911 | 5804.03 |
| major outer membrane lipoprotein | ALQ79_02311 | Not Available | Positive | 5731147 - 5731413 | 9387.05 |
| hypothetical protein | ALQ79_101658 | Not Available | Negative | 5731898 - 5732038 | 5111.22 |
| erfk/ybis/ycfs/ynhg protein | ALQ79_02312 | Not Available | Negative | 5732098 - 5733063 | 34404.4 |
| hypothetical protein | ALQ79_02313 | Not Available | Negative | 5733176 - 5733457 | 10731.3 |
| acyl-coa thioesterase i | ALQ79_05045 | Not Available | Negative | 5733514 - 5734119 | 21171.7 |
| abc transporter, atp-binding protein | ALQ79_05046 | Not Available | Positive | 5733833 - 5734813 | 35021.9 |
| permease | ALQ79_02315 | Not Available | Positive | 5734813 - 5737329 | 89398.9 |
| transcription elongation factor greb | ALQ79_02316 | Not Available | Negative | 5737367 - 5737861 | 19461.1 |
| hypothetical protein | ALQ79_02317 | Not Available | Negative | 5737888 - 5738217 | 12324.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







