Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter | ALQ79_05341 | Not Available | Negative | 5653821 - 5655293 | 54738.4 |
| hypothetical protein | ALQ79_03409 | Not Available | Positive | 5655573 - 5656079 | 18345.9 |
| Trna-arg | Not Available | Not Available | Positive | 5656124 - 5656200 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 5656288 - 5656364 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 5656474 - 5656564 | Not Available |
| carbon storage regulator -like protein | ALQ79_03410 | Not Available | Negative | 5656627 - 5656815 | 6953.53 |
| aspartokinase | ALQ79_03411 | Not Available | Negative | 5656987 - 5658219 | 44447.4 |
| alanine--trna ligase | ALQ79_05342 | Not Available | Negative | 5658313 - 5661039 | 98185.5 |
| threonine aldolase | ALQ79_03413 | Not Available | Negative | 5661082 - 5662143 | 37751.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | ALQ79_03414 | Not Available | Positive | 5662592 - 5663104 | 18815.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







