Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl-amp cyclohydrolase | ALQ79_03751 | Not Available | Negative | 5588484 - 5588876 | 14884.7 |
| putative protein kinase ubib | ALQ79_05419 | Not Available | Negative | 5588944 - 5590563 | 62243.3 |
| hypothetical protein | ALQ79_03753 | Not Available | Negative | 5590560 - 5591183 | 22820.1 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | ALQ79_03754 | Not Available | Negative | 5591183 - 5591953 | 28424.3 |
| hypothetical protein | ALQ79_03755 | Not Available | Positive | 5592040 - 5592375 | 12223.9 |
| polyhydroxyalkanoate granule-associated protein phai | ALQ79_03756 | Not Available | Positive | 5592474 - 5592947 | 17574.9 |
| polyhydroxyalkanoate granule-associated protein phaf | ALQ79_03757 | Not Available | Positive | 5592958 - 5593743 | 26736.9 |
| transcriptional regulator phad | ALQ79_03758 | Not Available | Negative | 5593978 - 5594616 | 24400.8 |
| poly-hydroxyalkanoic acid synthase, class ii | ALQ79_05420 | Not Available | Negative | 5594659 - 5596341 | 62784.5 |
| poly depolymerase | ALQ79_03760 | Not Available | Negative | 5596498 - 5597355 | 31636.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







