Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | ALQ79_100098 | Not Available | Negative | 5568738 - 5568995 | 9392.28 |
| phosphoglycerate kinase | ALQ79_04480 | Not Available | Negative | 5568996 - 5570165 | 40482.9 |
| d-erythrose-4-phosphate dehydrogenase | ALQ79_04481 | Not Available | Negative | 5570182 - 5571225 | 38344.9 |
| transketolase | ALQ79_05608 | Not Available | Negative | 5571377 - 5573455 | 75460.2 |
| regulatory protein, arsr | ALQ79_04483 | Not Available | Positive | 5573634 - 5574629 | 36220.6 |
| s-adenosylmethionine synthase | ALQ79_04484 | Not Available | Positive | 5574650 - 5575840 | 42589.6 |
| lysine exporter protein lyse/ygga | ALQ79_04485 | Not Available | Negative | 5575921 - 5576541 | 21667.9 |
| hypothetical protein | ALQ79_01889 | Not Available | Positive | 5576809 - 5577066 | 8735.12 |
| hypothetical protein | ALQ79_01890 | Not Available | Negative | 5577074 - 5577385 | 11891.6 |
| hypothetical protein | ALQ79_01891 | Not Available | Negative | 5577376 - 5577723 | 12980.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







