Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, periplasmic substrate-binding protein | ALQ79_01160 | Not Available | Positive | 443258 - 445114 | 69888.8 |
| abc transporter permease | ALQ79_01161 | Not Available | Positive | 445116 - 446189 | 39308.6 |
| abc transporter, permease protein | ALQ79_01162 | Not Available | Positive | 446191 - 447210 | 38006.8 |
| peptide abc transporter, atp-binding protein | ALQ79_01163 | Not Available | Positive | 447212 - 448822 | 58847.9 |
| enoyl | ALQ79_01164 | Not Available | Positive | 448841 - 449635 | 27924.4 |
| periplasmic folding chaperone | ALQ79_01165 | Not Available | Negative | 449746 - 451629 | 68977.5 |
| nucleoid protein hu beta subunit | ALQ79_01166 | Not Available | Negative | 451835 - 452107 | 9106.01 |
| lon protease | ALQ79_04771 | Not Available | Negative | 452254 - 454686 | 90356.7 |
| atp-dependent clp protease atp-binding subunit clpx | ALQ79_01168 | Not Available | Negative | 454861 - 456144 | 46959.2 |
| atp-dependent clp protease proteolytic subunit | ALQ79_01169 | Not Available | Negative | 456251 - 456901 | 23953.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







