Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxyphosphooctonate aldolase | ALQ79_01718 | Not Available | Positive | 5455691 - 5456536 | 30934.6 |
| enolase | ALQ79_04889 | Not Available | Positive | 5456574 - 5457962 | 49243.4 |
| cell division protein ftsb | ALQ79_01720 | Not Available | Positive | 5458153 - 5458431 | 10472.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | ALQ79_01721 | Not Available | Positive | 5458445 - 5459155 | 25885.9 |
| lysr family transcriptional regulator | ALQ79_04890 | Not Available | Negative | 5459156 - 5460052 | 34018.8 |
| alcohol dehydrogenase, s iii | ALQ79_01723 | Not Available | Positive | 5460154 - 5461269 | 39406.9 |
| esterase | ALQ79_01724 | Not Available | Positive | 5461345 - 5462190 | 31403.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | ALQ79_01725 | Not Available | Positive | 5462243 - 5462716 | 16765.3 |
| trna pseudouridine synthase d | ALQ79_01726 | Not Available | Positive | 5462713 - 5463771 | 38842.1 |
| 5'-nucleotidase sure | ALQ79_01727 | Not Available | Positive | 5463759 - 5464508 | 26599.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







