Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna large subunit methyltransferase a | ALQ79_01690 | Not Available | Negative | 5419907 - 5420716 | 30030.9 |
| succinyl-diaminopimelate desuccinylase | ALQ79_01691 | Not Available | Negative | 5420716 - 5421867 | 41004.6 |
| thif protein | ALQ79_01692 | Not Available | Positive | 5422275 - 5423111 | 29925.2 |
| cysteine sulfinate desulfinase | ALQ79_01693 | Not Available | Negative | 5423506 - 5424711 | 43133.6 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | ALQ79_01694 | Not Available | Negative | 5424770 - 5425804 | 36253.6 |
| arsc protein | ALQ79_01695 | Not Available | Negative | 5425852 - 5426241 | 14596.5 |
| hypothetical protein | ALQ79_100197 | Not Available | Positive | 5426376 - 5426663 | 10945.2 |
| hypothetical protein | ALQ79_04882 | Not Available | Negative | 5426823 - 5427761 | 35004.5 |
| succinyldiaminopimelate transaminase | ALQ79_01697 | Not Available | Negative | 5427803 - 5428996 | 43678.2 |
| bifunctional uridylyltransferase/uridylyl-removing enzyme | ALQ79_04885 | Not Available | Negative | 5429048 - 5431798 | 104697.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







