Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-glutamate o-methyltransferase | ALQ79_100064 | Not Available | Positive | 5392834 - 5394120 | 46457.4 |
| chew domain-containing protein wspd | ALQ79_01668 | Not Available | Positive | 5394120 - 5394809 | 24935.7 |
| sensor histidine kinase/response regulator | ALQ79_01669 | Not Available | Positive | 5394806 - 5397193 | 87003.2 |
| chemotaxis response regulator protein-glutamate methylesterase | ALQ79_01670 | Not Available | Positive | 5397190 - 5398200 | 36007.1 |
| response regulator wspr | ALQ79_01671 | Not Available | Positive | 5398246 - 5399250 | 37053.4 |
| hypothetical protein | ALQ79_102332 | Not Available | Negative | 5399396 - 5399527 | 4925.02 |
| peptide chain release factor 2 | ALQ79_01672 | Not Available | Positive | 5399582 - 5400463 | 32698.3 |
| lysine--trna ligase | ALQ79_01673 | Not Available | Positive | 5400533 - 5402035 | 57025.0 |
| transcriptional regulator, tetr family | ALQ79_01674 | Not Available | Positive | 5402113 - 5402838 | 27283.1 |
| hypothetical protein | ALQ79_102491 | Not Available | Negative | 5402839 - 5402961 | 4381.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







