Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_01660 | Not Available | Positive | 5375966 - 5376274 | 11021.5 |
| hypothetical protein | ALQ79_04870 | Not Available | Negative | 5376458 - 5377336 | 32791.7 |
| yaeq protein family | ALQ79_04869 | Not Available | Positive | 5377340 - 5378173 | 31408.3 |
| single-stranded-dna-specific exonuclease recj | ALQ79_01662 | Not Available | Positive | 5378236 - 5379951 | 62466.7 |
| xenobiotic reductase | ALQ79_01663 | Not Available | Positive | 5380020 - 5381171 | 42310.1 |
| sensory box histidine kinase/response regulator | ALQ79_04871 | Not Available | Negative | 5381230 - 5383326 | 76753.3 |
| hypothetical protein | ALQ79_01665 | Not Available | Positive | 5383606 - 5384352 | 26202.2 |
| leucine-rich repeat-containing protein | ALQ79_04875 | Not Available | Negative | 5384410 - 5390412 | 224975.0 |
| methyl-accepting chemotaxis protein wspa | ALQ79_01666 | Not Available | Positive | 5390670 - 5392292 | 58852.8 |
| chew domain-containing protein wspb | ALQ79_01667 | Not Available | Positive | 5392301 - 5392837 | 19979.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







