Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | ALQ79_01650 | Not Available | Positive | 5363114 - 5363371 | 9580.42 |
| ribosome maturation factor rimm | ALQ79_01651 | Not Available | Positive | 5363377 - 5363916 | 20102.1 |
| trna -methyltransferase | ALQ79_01652 | Not Available | Positive | 5363922 - 5364674 | 28034.2 |
| 50s ribosomal protein l19 | ALQ79_01653 | Not Available | Positive | 5364719 - 5365069 | 12969.9 |
| tyrosine recombinase xerd | ALQ79_01654 | Not Available | Positive | 5365173 - 5366069 | 33639.7 |
| thiol:disulfide interchange protein dsbc | ALQ79_01655 | Not Available | Positive | 5366215 - 5366955 | 26451.1 |
| homoserine dehydrogenase | ALQ79_01656 | Not Available | Positive | 5367101 - 5368405 | 46189.9 |
| threonine synthase | ALQ79_01657 | Not Available | Positive | 5368504 - 5369913 | 51786.9 |
| signal transduction histidine kinase | ALQ79_01658 | Not Available | Positive | 5370033 - 5373653 | 133621.0 |
| response regulator/eal domain protein | ALQ79_01659 | Not Available | Positive | 5373703 - 5375055 | 48738.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







