Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cp4-57 prophage protein | ALQ79_01150 | Not Available | Negative | 428596 - 430782 | 81789.4 |
| cp4-57 prophage protein | ALQ79_01151 | Not Available | Negative | 430779 - 432443 | 64084.5 |
| hypothetical protein | ALQ79_01152 | Not Available | Negative | 432650 - 435100 | 90802.2 |
| serine acetyltransferase | ALQ79_01153 | Not Available | Positive | 435783 - 436547 | 26972.2 |
| hypothetical protein | ALQ79_01154 | Not Available | Positive | 436563 - 437468 | 33266.6 |
| ribonuclease h | ALQ79_01155 | Not Available | Negative | 437490 - 437939 | 16655.8 |
| hypothetical protein | ALQ79_01156 | Not Available | Negative | 437986 - 438783 | 29166.3 |
| hydroxyacylglutathione hydrolase | ALQ79_01157 | Not Available | Positive | 438829 - 439608 | 28866.1 |
| peptidoglycan-binding lysm | ALQ79_04769 | Not Available | Positive | 439708 - 441294 | 58978.6 |
| abc transporter periplasmic substrate-binding protein | ALQ79_04770 | Not Available | Positive | 441291 - 443261 | 74429.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







